AmitkDataSet

AmitkDataSet

Synopsis

#define             AMITK_DATA_SET_MODALITY             (ds)
#define             AMITK_DATA_SET_VOXEL_SIZE           (ds)
#define             AMITK_DATA_SET_VOXEL_SIZE_X         (ds)
#define             AMITK_DATA_SET_VOXEL_SIZE_Y         (ds)
#define             AMITK_DATA_SET_VOXEL_SIZE_Z         (ds)
#define             AMITK_DATA_SET_VOXEL_VOLUME         (ds)
#define             AMITK_DATA_SET_RAW_DATA             (ds)
#define             AMITK_DATA_SET_DIM                  (ds)
#define             AMITK_DATA_SET_DIM_X                (ds)
#define             AMITK_DATA_SET_DIM_Y                (ds)
#define             AMITK_DATA_SET_DIM_Z                (ds)
#define             AMITK_DATA_SET_DIM_G                (ds)
#define             AMITK_DATA_SET_DIM_T                (ds)
#define             AMITK_DATA_SET_FORMAT               (ds)
#define             AMITK_DATA_SET_NUM_GATES            (ds)
#define             AMITK_DATA_SET_NUM_FRAMES           (ds)
#define             AMITK_DATA_SET_TOTAL_PLANES         (ds)
#define             AMITK_DATA_SET_DISTRIBUTION         (ds)
#define             AMITK_DATA_SET_COLOR_TABLE          (ds,
                                                         view_mode)
#define             AMITK_DATA_SET_COLOR_TABLE_INDEPENDENT(ds,
                                                         view_mode)
#define             AMITK_DATA_SET_INTERPOLATION        (ds)
#define             AMITK_DATA_SET_DYNAMIC              (ds)
#define             AMITK_DATA_SET_GATED                (ds)
#define             AMITK_DATA_SET_THRESHOLDING         (ds)
#define             AMITK_DATA_SET_THRESHOLD_STYLE      (ds)
#define             AMITK_DATA_SET_SLICE_PARENT         (ds)
#define             AMITK_DATA_SET_SCAN_DATE            (ds)
#define             AMITK_DATA_SET_SUBJECT_NAME         (ds)
#define             AMITK_DATA_SET_SUBJECT_ID           (ds)
#define             AMITK_DATA_SET_SUBJECT_DOB          (ds)
#define             AMITK_DATA_SET_SCAN_START           (ds)
#define             AMITK_DATA_SET_THRESHOLD_REF_FRAME  (ds,
                                                         ref_frame)
#define             AMITK_DATA_SET_THRESHOLD_MAX        (ds,
                                                         ref_frame)
#define             AMITK_DATA_SET_THRESHOLD_MIN        (ds,
                                                         ref_frame)
#define             AMITK_DATA_SET_SCALING_TYPE         (ds)
#define             AMITK_DATA_SET_SCALING_HAS_INTERCEPT(ds)
#define             AMITK_DATA_SET_SUBJECT_ORIENTATION  (ds)
#define             AMITK_DATA_SET_CONVERSION           (ds)
#define             AMITK_DATA_SET_SCALE_FACTOR         (ds)
#define             AMITK_DATA_SET_INJECTED_DOSE        (ds)
#define             AMITK_DATA_SET_DISPLAYED_DOSE_UNIT  (ds)
#define             AMITK_DATA_SET_SUBJECT_WEIGHT       (ds)
#define             AMITK_DATA_SET_DISPLAYED_WEIGHT_UNIT(ds)
#define             AMITK_DATA_SET_CYLINDER_FACTOR      (ds)
#define             AMITK_DATA_SET_DISPLAYED_CYLINDER_UNIT(ds)
#define             AMITK_DATA_SET_THRESHOLD_WINDOW     (ds,
                                                         i_win,
                                                         limit)
#define             AMITK_DATA_SET_VIEW_START_GATE      (ds)
#define             AMITK_DATA_SET_VIEW_END_GATE        (ds)
#define             AMITK_DATA_SET_NUM_VIEW_GATES       (ds)
#define             AMITK_DATA_SET_DISTRIBUTION_SIZE
enum                AmitkOperation;
enum                AmitkInterpolation;
enum                AmitkThresholding;
enum                AmitkScalingType;
enum                AmitkConversion;
enum                AmitkWeightUnit;
enum                AmitkDoseUnit;
enum                AmitkCylinderUnit;
enum                AmitkSubjectOrientation;
enum                AmitkImportMethod;
enum                AmitkExportMethod;
struct              AmitkDataSet;
struct              AmitkDataSetClass;
AmitkDataSet *      amitk_data_set_new                  (AmitkPreferences *preferences,
                                                         const AmitkModality modality);
AmitkDataSet *      amitk_data_set_new_with_data        (AmitkPreferences *preferences,
                                                         const AmitkModality modality,
                                                         const AmitkFormat format,
                                                         const AmitkVoxel dim,
                                                         const AmitkScalingType scaling_type);
AmitkDataSet *      amitk_data_set_import_raw_file      (const gchar *file_name,
                                                         const AmitkRawFormat raw_format,
                                                         const AmitkVoxel data_dim,
                                                         guint file_offset,
                                                         AmitkPreferences *preferences,
                                                         const AmitkModality modality,
                                                         const gchar *data_set_name,
                                                         const AmitkPoint voxel_size,
                                                         const amide_data_t scale_factor,
                                                         AmitkUpdateFunc update_func,
                                                         gpointer update_data);
GList *             amitk_data_set_import_file          (AmitkImportMethod method,
                                                         int submethod,
                                                         const gchar *filename,
                                                         AmitkPreferences *preferences,
                                                         AmitkUpdateFunc update_func,
                                                         gpointer update_data);
void                amitk_data_set_export_to_file       (AmitkDataSet *ds,
                                                         const AmitkExportMethod method,
                                                         const int submethod,
                                                         const gchar *filename,
                                                         const gboolean resliced,
                                                         const AmitkPoint voxel_size,
                                                         const AmitkVolume *bounding_box,
                                                         AmitkUpdateFunc update_func,
                                                         gpointer update_data);
void                amitk_data_sets_export_to_file      (GList *data_sets,
                                                         const AmitkExportMethod method,
                                                         const int submethod,
                                                         const gchar *filename,
                                                         const AmitkPoint voxel_size,
                                                         const AmitkVolume *bounding_box,
                                                         AmitkUpdateFunc update_func,
                                                         gpointer update_data);
amide_data_t        amitk_data_set_get_global_max       (AmitkDataSet *ds);
amide_data_t        amitk_data_set_get_global_min       (AmitkDataSet *ds);
amide_data_t        amitk_data_set_get_frame_max        (AmitkDataSet *ds,
                                                         const guint frame);
amide_data_t        amitk_data_set_get_frame_min        (AmitkDataSet *ds,
                                                         const guint frame);
AmitkColorTable     amitk_data_set_get_color_table_to_use
                                                        (AmitkDataSet *ds,
                                                         const AmitkViewMode view_mode);
void                amitk_data_set_set_modality         (AmitkDataSet *ds,
                                                         const AmitkModality modality);
void                amitk_data_set_set_scan_start       (AmitkDataSet *ds,
                                                         const amide_time_t start);
void                amitk_data_set_set_frame_duration   (AmitkDataSet *ds,
                                                         const guint frame,
                                                         amide_time_t duration);
void                amitk_data_set_set_voxel_size       (AmitkDataSet *ds,
                                                         const AmitkPoint voxel_size);
void                amitk_data_set_set_thresholding     (AmitkDataSet *ds,
                                                         const AmitkThresholding thresholding);
void                amitk_data_set_set_threshold_style  (AmitkDataSet *ds,
                                                         const AmitkThresholdStyle threshold_style);
void                amitk_data_set_set_threshold_max    (AmitkDataSet *ds,
                                                         guint which_reference,
                                                         amide_data_t value);
void                amitk_data_set_set_threshold_min    (AmitkDataSet *ds,
                                                         guint which_reference,
                                                         amide_data_t value);
void                amitk_data_set_set_threshold_ref_frame
                                                        (AmitkDataSet *ds,
                                                         guint which_reference,
                                                         guint frame);
void                amitk_data_set_set_color_table      (AmitkDataSet *ds,
                                                         const AmitkViewMode view_mode,
                                                         const AmitkColorTable new_color_table);
void                amitk_data_set_set_color_table_independent
                                                        (AmitkDataSet *ds,
                                                         const AmitkViewMode view_mode,
                                                         const gboolean independent);
void                amitk_data_set_set_interpolation    (AmitkDataSet *ds,
                                                         const AmitkInterpolation new_interpolation);
void                amitk_data_set_set_subject_orientation
                                                        (AmitkDataSet *ds,
                                                         const AmitkSubjectOrientation subject_orientation);
void                amitk_data_set_set_scan_date        (AmitkDataSet *ds,
                                                         const gchar *new_date);
void                amitk_data_set_set_subject_name     (AmitkDataSet *ds,
                                                         const gchar *new_name);
void                amitk_data_set_set_subject_id       (AmitkDataSet *ds,
                                                         const gchar *new_id);
void                amitk_data_set_set_subject_dob      (AmitkDataSet *ds,
                                                         const gchar *new_dob);
void                amitk_data_set_set_conversion       (AmitkDataSet *ds,
                                                         AmitkConversion new_conversion);
void                amitk_data_set_set_scale_factor     (AmitkDataSet *ds,
                                                         amide_data_t new_scale_factor);
void                amitk_data_set_set_injected_dose    (AmitkDataSet *ds,
                                                         amide_data_t new_injected_dose);
void                amitk_data_set_set_subject_weight   (AmitkDataSet *ds,
                                                         amide_data_t new_subject_weight);
void                amitk_data_set_set_cylinder_factor  (AmitkDataSet *ds,
                                                         amide_data_t new_cylinder_factor);
void                amitk_data_set_set_displayed_dose_unit
                                                        (AmitkDataSet *ds,
                                                         AmitkDoseUnit new_dose_unit);
void                amitk_data_set_set_displayed_weight_unit
                                                        (AmitkDataSet *ds,
                                                         AmitkWeightUnit new_weight_unit);
void                amitk_data_set_set_displayed_cylinder_unit
                                                        (AmitkDataSet *ds,
                                                         AmitkCylinderUnit new_cylinder_unit);
void                amitk_data_set_set_threshold_window (AmitkDataSet *ds,
                                                         const AmitkWindow window,
                                                         const AmitkLimit limit,
                                                         const amide_data_t value);
void                amitk_data_set_set_view_start_gate  (AmitkDataSet *ds,
                                                         amide_intpoint_t start_gate);
void                amitk_data_set_set_view_end_gate    (AmitkDataSet *ds,
                                                         amide_intpoint_t end_gate);
amide_time_t        amitk_data_set_get_start_time       (const AmitkDataSet *ds,
                                                         const guint frame);
amide_time_t        amitk_data_set_get_end_time         (const AmitkDataSet *ds,
                                                         const guint frame);
amide_time_t        amitk_data_set_get_midpt_time       (const AmitkDataSet *ds,
                                                         const guint frame);
guint               amitk_data_set_get_frame            (const AmitkDataSet *ds,
                                                         const amide_time_t time);
amide_time_t        amitk_data_set_get_frame_duration   (const AmitkDataSet *ds,
                                                         guint frame);
amide_time_t        amitk_data_set_get_min_frame_duration
                                                        (const AmitkDataSet *ds);
void                amitk_data_set_calc_far_corner      (AmitkDataSet *ds);
void                amitk_data_set_calc_max_min         (AmitkDataSet *ds,
                                                         AmitkUpdateFunc update_func,
                                                         gpointer update_data);
amide_data_t        amitk_data_set_get_max              (AmitkDataSet *ds,
                                                         const amide_time_t start,
                                                         const amide_time_t duration);
amide_data_t        amitk_data_set_get_min              (AmitkDataSet *ds,
                                                         const amide_time_t start,
                                                         const amide_time_t duration);
void                amitk_data_set_get_thresholding_max_min
                                                        (AmitkDataSet *ds,
                                                         AmitkDataSet *slice,
                                                         const amide_time_t start,
                                                         const amide_time_t duration,
                                                         amide_data_t *max,
                                                         amide_data_t *min);
void                amitk_data_set_calc_distribution    (AmitkDataSet *ds,
                                                         AmitkUpdateFunc update_func,
                                                         gpointer update_data);
amide_data_t        amitk_data_set_get_internal_value   (const AmitkDataSet *ds,
                                                         const AmitkVoxel i);
amide_data_t        amitk_data_set_get_value            (const AmitkDataSet *ds,
                                                         const AmitkVoxel i);
amide_data_t        amitk_data_set_get_internal_scaling_factor
                                                        (const AmitkDataSet *ds,
                                                         const AmitkVoxel i);
amide_data_t        amitk_data_set_get_scaling_factor   (const AmitkDataSet *ds,
                                                         const AmitkVoxel i);
amide_data_t        amitk_data_set_get_scaling_intercept
                                                        (const AmitkDataSet *ds,
                                                         const AmitkVoxel i);
void                amitk_data_set_set_value            (AmitkDataSet *ds,
                                                         const AmitkVoxel i,
                                                         const amide_data_t value,
                                                         const gboolean signal_change);
void                amitk_data_set_set_internal_value   (AmitkDataSet *ds,
                                                         const AmitkVoxel i,
                                                         const amide_data_t internal_value,
                                                         const gboolean signal_change);
void                amitk_data_set_get_projections      (AmitkDataSet *ds,
                                                         const guint frame,
                                                         const guint gate,
                                                         AmitkDataSet **projections,
                                                         AmitkUpdateFunc update_func,
                                                         gpointer update_data);
AmitkDataSet *      amitk_data_set_get_cropped          (const AmitkDataSet *ds,
                                                         const AmitkVoxel start,
                                                         const AmitkVoxel end,
                                                         const AmitkFormat format,
                                                         const AmitkScalingType scaling_type,
                                                         AmitkUpdateFunc update_func,
                                                         gpointer update_data);
AmitkDataSet *      amitk_data_set_get_filtered         (const AmitkDataSet *ds,
                                                         const AmitkFilter filter_type,
                                                         const gint kernel_size,
                                                         const amide_real_t fwhm,
                                                         AmitkUpdateFunc update_func,
                                                         gpointer update_data);
AmitkDataSet *      amitk_data_set_get_slice            (AmitkDataSet *ds,
                                                         const amide_time_t start,
                                                         const amide_time_t duration,
                                                         const amide_intpoint_t gate,
                                                         const AmitkCanvasPoint pixel_size,
                                                         const AmitkVolume *slice_volume);
void                amitk_data_set_get_line_profile     (AmitkDataSet *ds,
                                                         const amide_time_t start,
                                                         const amide_time_t duration,
                                                         const AmitkPoint start_point,
                                                         const AmitkPoint end_point,
                                                         GPtrArray **preturn_data);
gint                amitk_data_sets_count               (GList *objects,
                                                         gboolean recurse);
amide_time_t        amitk_data_sets_get_min_frame_duration
                                                        (GList *objects);
amide_real_t        amitk_data_sets_get_min_voxel_size  (GList *objects);
amide_real_t        amitk_data_sets_get_max_min_voxel_size
                                                        (GList *objects);
GList *             amitk_data_sets_get_slices          (GList *objects,
                                                         GList **pslice_cache,
                                                         const gint max_slice_cache_size,
                                                         const amide_time_t start,
                                                         const amide_time_t duration,
                                                         const amide_intpoint_t gate,
                                                         const AmitkCanvasPoint pixel_size,
                                                         const AmitkVolume *view_volume);
AmitkDataSet *      amitk_data_sets_find_with_slice_parent
                                                        (GList *slices,
                                                         const AmitkDataSet *slice_parent);
GList *             amitk_data_sets_remove_with_slice_parent
                                                        (GList *slices,
                                                         const AmitkDataSet *slice_parent);
AmitkDataSet *      amitk_data_sets_math                (AmitkDataSet *ds1,
                                                         AmitkDataSet *ds2,
                                                         AmitkOperation operation,
                                                         gboolean by_frame,
                                                         AmitkUpdateFunc update_func,
                                                         gpointer update_data);
#define             amitk_data_set_get_frame_duration_mem(ds)
#define             amitk_data_set_get_frame_max_min_mem(ds)
#define             amitk_data_set_dynamic              (ds)
const gchar *       amitk_scaling_type_get_name         (const AmitkScalingType scaling_type);
const gchar *       amitk_operation_get_name            (const AmitkOperation operation);
const gchar *       amitk_interpolation_get_name        (const AmitkInterpolation interpolation);
const gchar *       amitk_subject_orientation_get_name  (const AmitkSubjectOrientation subject_orientation);
const gchar *       amitk_thresholding_get_name         (const AmitkThresholding thresholding);
const gchar *       amitk_threshold_style_get_name      (const AmitkThresholdStyle threshold_style);
const gchar *       amitk_conversion_get_name           (const AmitkConversion conversion);
const gchar *       amitk_weight_unit_get_name          (const AmitkWeightUnit weight_unit);
const gchar *       amitk_dose_unit_get_name            (const AmitkDoseUnit dose_unit);
const gchar *       amitk_cylinder_unit_get_name        (const AmitkCylinderUnit cylinder_unit);
amide_data_t        amitk_weight_unit_convert_to        (const amide_data_t kg,
                                                         const AmitkWeightUnit weight_unit);
amide_data_t        amitk_weight_unit_convert_from      (const amide_data_t weight,
                                                         const AmitkWeightUnit weight_unit);
amide_data_t        amitk_dose_unit_convert_to          (const amide_data_t MBq,
                                                         const AmitkDoseUnit dose_unit);
amide_data_t        amitk_dose_unit_convert_from        (const amide_data_t dose,
                                                         const AmitkDoseUnit dose_unit);
amide_data_t        amitk_cylinder_unit_convert_to      (const amide_data_t MBq_cc_image_units,
                                                         const AmitkCylinderUnit cylinder_unit);
amide_data_t        amitk_cylinder_unit_convert_from    (const amide_data_t cylinder_factor,
                                                         const AmitkCylinderUnit cylinder_unit);

Description

Details

AMITK_DATA_SET_MODALITY()

#define AMITK_DATA_SET_MODALITY(ds)                (AMITK_DATA_SET(ds)->modality)


AMITK_DATA_SET_VOXEL_SIZE()

#define AMITK_DATA_SET_VOXEL_SIZE(ds)              (AMITK_DATA_SET(ds)->voxel_size)


AMITK_DATA_SET_VOXEL_SIZE_X()

#define AMITK_DATA_SET_VOXEL_SIZE_X(ds)            (AMITK_DATA_SET(ds)->voxel_size.x)


AMITK_DATA_SET_VOXEL_SIZE_Y()

#define AMITK_DATA_SET_VOXEL_SIZE_Y(ds)            (AMITK_DATA_SET(ds)->voxel_size.y)


AMITK_DATA_SET_VOXEL_SIZE_Z()

#define AMITK_DATA_SET_VOXEL_SIZE_Z(ds)            (AMITK_DATA_SET(ds)->voxel_size.z)


AMITK_DATA_SET_VOXEL_VOLUME()

#define AMITK_DATA_SET_VOXEL_VOLUME(ds)            (AMITK_DATA_SET(ds)->voxel_size.z*AMITK_DATA_SET(ds)->voxel_size.y*AMITK_DATA_SET(ds)->voxel_size.x)


AMITK_DATA_SET_RAW_DATA()

#define AMITK_DATA_SET_RAW_DATA(ds)                (AMITK_DATA_SET(ds)->raw_data)


AMITK_DATA_SET_DIM()

#define AMITK_DATA_SET_DIM(ds)                     (AMITK_RAW_DATA_DIM(AMITK_DATA_SET_RAW_DATA(ds)))


AMITK_DATA_SET_DIM_X()

#define AMITK_DATA_SET_DIM_X(ds)                   (AMITK_RAW_DATA_DIM_X(AMITK_DATA_SET_RAW_DATA(ds)))


AMITK_DATA_SET_DIM_Y()

#define AMITK_DATA_SET_DIM_Y(ds)                   (AMITK_RAW_DATA_DIM_Y(AMITK_DATA_SET_RAW_DATA(ds)))


AMITK_DATA_SET_DIM_Z()

#define AMITK_DATA_SET_DIM_Z(ds)                   (AMITK_RAW_DATA_DIM_Z(AMITK_DATA_SET_RAW_DATA(ds)))


AMITK_DATA_SET_DIM_G()

#define AMITK_DATA_SET_DIM_G(ds)                   (AMITK_RAW_DATA_DIM_G(AMITK_DATA_SET_RAW_DATA(ds)))


AMITK_DATA_SET_DIM_T()

#define AMITK_DATA_SET_DIM_T(ds)                   (AMITK_RAW_DATA_DIM_T(AMITK_DATA_SET_RAW_DATA(ds)))


AMITK_DATA_SET_FORMAT()

#define AMITK_DATA_SET_FORMAT(ds)                  (AMITK_RAW_DATA_FORMAT(AMITK_DATA_SET_RAW_DATA(ds)))


AMITK_DATA_SET_NUM_GATES()

#define AMITK_DATA_SET_NUM_GATES(ds)               (AMITK_DATA_SET_DIM_G(ds))


AMITK_DATA_SET_NUM_FRAMES()

#define AMITK_DATA_SET_NUM_FRAMES(ds)              (AMITK_DATA_SET_DIM_T(ds))


AMITK_DATA_SET_TOTAL_PLANES()

#define AMITK_DATA_SET_TOTAL_PLANES(ds)            (AMITK_DATA_SET_DIM_Z(ds)*AMITK_DATA_SET_DIM_G(ds)*AMITK_DATA_SET_DIM_T(ds))


AMITK_DATA_SET_DISTRIBUTION()

#define AMITK_DATA_SET_DISTRIBUTION(ds)            (AMITK_DATA_SET(ds)->distribution)


AMITK_DATA_SET_COLOR_TABLE()

#define AMITK_DATA_SET_COLOR_TABLE(ds, view_mode)  (AMITK_DATA_SET(ds)->color_table[view_mode])


AMITK_DATA_SET_COLOR_TABLE_INDEPENDENT()

#define AMITK_DATA_SET_COLOR_TABLE_INDEPENDENT(ds, view_mode) (AMITK_DATA_SET(ds)->color_table_independent[view_mode])


AMITK_DATA_SET_INTERPOLATION()

#define AMITK_DATA_SET_INTERPOLATION(ds)           (AMITK_DATA_SET(ds)->interpolation)


AMITK_DATA_SET_DYNAMIC()

#define AMITK_DATA_SET_DYNAMIC(ds)                 (AMITK_DATA_SET_NUM_FRAMES(ds) > 1)


AMITK_DATA_SET_GATED()

#define AMITK_DATA_SET_GATED(ds)                   (AMITK_DATA_SET_NUM_GATES(ds) > 1)


AMITK_DATA_SET_THRESHOLDING()

#define AMITK_DATA_SET_THRESHOLDING(ds)            (AMITK_DATA_SET(ds)->thresholding)


AMITK_DATA_SET_THRESHOLD_STYLE()

#define AMITK_DATA_SET_THRESHOLD_STYLE(ds)         (AMITK_DATA_SET(ds)->threshold_style)


AMITK_DATA_SET_SLICE_PARENT()

#define AMITK_DATA_SET_SLICE_PARENT(ds)            (AMITK_DATA_SET(ds)->slice_parent)


AMITK_DATA_SET_SCAN_DATE()

#define AMITK_DATA_SET_SCAN_DATE(ds)               (AMITK_DATA_SET(ds)->scan_date)


AMITK_DATA_SET_SUBJECT_NAME()

#define AMITK_DATA_SET_SUBJECT_NAME(ds)            (AMITK_DATA_SET(ds)->subject_name)


AMITK_DATA_SET_SUBJECT_ID()

#define AMITK_DATA_SET_SUBJECT_ID(ds)              (AMITK_DATA_SET(ds)->subject_id)


AMITK_DATA_SET_SUBJECT_DOB()

#define AMITK_DATA_SET_SUBJECT_DOB(ds)             (AMITK_DATA_SET(ds)->subject_dob)


AMITK_DATA_SET_SCAN_START()

#define AMITK_DATA_SET_SCAN_START(ds)              (AMITK_DATA_SET(ds)->scan_start)


AMITK_DATA_SET_THRESHOLD_REF_FRAME()

#define AMITK_DATA_SET_THRESHOLD_REF_FRAME(ds,ref_frame) (AMITK_DATA_SET(ds)->threshold_ref_frame[ref_frame])


AMITK_DATA_SET_THRESHOLD_MAX()

#define AMITK_DATA_SET_THRESHOLD_MAX(ds, ref_frame)      (AMITK_DATA_SET(ds)->threshold_max[ref_frame])


AMITK_DATA_SET_THRESHOLD_MIN()

#define AMITK_DATA_SET_THRESHOLD_MIN(ds, ref_frame)      (AMITK_DATA_SET(ds)->threshold_min[ref_frame])


AMITK_DATA_SET_SCALING_TYPE()

#define AMITK_DATA_SET_SCALING_TYPE(ds)            (AMITK_DATA_SET(ds)->scaling_type)


AMITK_DATA_SET_SCALING_HAS_INTERCEPT()

#define AMITK_DATA_SET_SCALING_HAS_INTERCEPT(ds)   ((AMITK_DATA_SET(ds)->scaling_type == AMITK_SCALING_TYPE_0D_WITH_INTERCEPT) || (AMITK_DATA_SET(ds)->scaling_type == AMITK_SCALING_TYPE_1D_WITH_INTERCEPT) || (AMITK_DATA_SET(ds)->scaling_type == AMITK_SCALING_TYPE_2D_WITH_INTERCEPT)) 


AMITK_DATA_SET_SUBJECT_ORIENTATION()

#define AMITK_DATA_SET_SUBJECT_ORIENTATION(ds)     (AMITK_DATA_SET(ds)->subject_orientation)


AMITK_DATA_SET_CONVERSION()

#define AMITK_DATA_SET_CONVERSION(ds)              (AMITK_DATA_SET(ds)->conversion)


AMITK_DATA_SET_SCALE_FACTOR()

#define AMITK_DATA_SET_SCALE_FACTOR(ds)            (AMITK_DATA_SET(ds)->scale_factor)


AMITK_DATA_SET_INJECTED_DOSE()

#define AMITK_DATA_SET_INJECTED_DOSE(ds)           (AMITK_DATA_SET(ds)->injected_dose)


AMITK_DATA_SET_DISPLAYED_DOSE_UNIT()

#define AMITK_DATA_SET_DISPLAYED_DOSE_UNIT(ds)     (AMITK_DATA_SET(ds)->displayed_dose_unit)


AMITK_DATA_SET_SUBJECT_WEIGHT()

#define AMITK_DATA_SET_SUBJECT_WEIGHT(ds)          (AMITK_DATA_SET(ds)->subject_weight)


AMITK_DATA_SET_DISPLAYED_WEIGHT_UNIT()

#define AMITK_DATA_SET_DISPLAYED_WEIGHT_UNIT(ds)   (AMITK_DATA_SET(ds)->displayed_weight_unit)


AMITK_DATA_SET_CYLINDER_FACTOR()

#define AMITK_DATA_SET_CYLINDER_FACTOR(ds)         (AMITK_DATA_SET(ds)->cylinder_factor)


AMITK_DATA_SET_DISPLAYED_CYLINDER_UNIT()

#define AMITK_DATA_SET_DISPLAYED_CYLINDER_UNIT(ds) (AMITK_DATA_SET(ds)->displayed_cylinder_unit)


AMITK_DATA_SET_THRESHOLD_WINDOW()

#define AMITK_DATA_SET_THRESHOLD_WINDOW(ds, i_win, limit) (AMITK_DATA_SET(ds)->threshold_window[i_win][limit])


AMITK_DATA_SET_VIEW_START_GATE()

#define AMITK_DATA_SET_VIEW_START_GATE(ds)         (AMITK_DATA_SET(ds)->view_start_gate)


AMITK_DATA_SET_VIEW_END_GATE()

#define AMITK_DATA_SET_VIEW_END_GATE(ds)           (AMITK_DATA_SET(ds)->view_end_gate)


AMITK_DATA_SET_NUM_VIEW_GATES()

#define AMITK_DATA_SET_NUM_VIEW_GATES(ds)          (AMITK_DATA_SET(ds)->num_view_gates)


AMITK_DATA_SET_DISTRIBUTION_SIZE

#define AMITK_DATA_SET_DISTRIBUTION_SIZE 256


enum AmitkOperation

typedef enum {
  AMITK_OPERATION_ADD,
  AMITK_OPERATION_SUB,
  AMITK_OPERATION_NUM
} AmitkOperation;


enum AmitkInterpolation

typedef enum {
  AMITK_INTERPOLATION_NEAREST_NEIGHBOR, 
  AMITK_INTERPOLATION_TRILINEAR, 
  AMITK_INTERPOLATION_NUM
} AmitkInterpolation;


enum AmitkThresholding

typedef enum {
  AMITK_THRESHOLDING_PER_SLICE, 
  AMITK_THRESHOLDING_PER_FRAME, 
  AMITK_THRESHOLDING_INTERPOLATE_FRAMES,
  AMITK_THRESHOLDING_GLOBAL, 
  AMITK_THRESHOLDING_NUM
} AmitkThresholding;


enum AmitkScalingType

typedef enum {
  AMITK_SCALING_TYPE_0D,
  AMITK_SCALING_TYPE_1D,
  AMITK_SCALING_TYPE_2D,
  AMITK_SCALING_TYPE_0D_WITH_INTERCEPT,
  AMITK_SCALING_TYPE_1D_WITH_INTERCEPT,
  AMITK_SCALING_TYPE_2D_WITH_INTERCEPT,
  AMITK_SCALING_TYPE_NUM
} AmitkScalingType;


enum AmitkConversion

typedef enum {
  AMITK_CONVERSION_STRAIGHT,
  AMITK_CONVERSION_PERCENT_ID_PER_CC,
  AMITK_CONVERSION_SUV,
  AMITK_CONVERSION_NUM
} AmitkConversion;


enum AmitkWeightUnit

typedef enum {
  AMITK_WEIGHT_UNIT_KILOGRAM,
  AMITK_WEIGHT_UNIT_GRAM,
  AMITK_WEIGHT_UNIT_POUND,
  AMITK_WEIGHT_UNIT_OUNCE,
  AMITK_WEIGHT_UNIT_NUM
} AmitkWeightUnit;


enum AmitkDoseUnit

typedef enum {
  AMITK_DOSE_UNIT_MEGABECQUEREL,
  AMITK_DOSE_UNIT_MILLICURIE,
  AMITK_DOSE_UNIT_MICROCURIE,
  AMITK_DOSE_UNIT_NANOCURIE,
  AMITK_DOSE_UNIT_NUM
} AmitkDoseUnit;


enum AmitkCylinderUnit

typedef enum {
  AMITK_CYLINDER_UNIT_MEGABECQUEREL_PER_CC_IMAGE_UNIT,
  AMITK_CYLINDER_UNIT_MILLICURIE_PER_CC_IMAGE_UNIT,
  AMITK_CYLINDER_UNIT_MICROCURIE_PER_CC_IMAGE_UNIT,
  AMITK_CYLINDER_UNIT_NANOCURIE_PER_CC_IMAGE_UNIT,
  AMITK_CYLINDER_UNIT_IMAGE_UNIT_CC_PER_MEGABECQUEREL,
  AMITK_CYLINDER_UNIT_IMAGE_UNIT_CC_PER_MILLICURIE,
  AMITK_CYLINDER_UNIT_IMAGE_UNIT_CC_PER_MICROCURIE,
  AMITK_CYLINDER_UNIT_IMAGE_UNIT_CC_PER_NANOCURIE,
  AMITK_CYLINDER_UNIT_NUM
} AmitkCylinderUnit;


enum AmitkSubjectOrientation

typedef enum {
  AMITK_SUBJECT_ORIENTATION_UNKNOWN,
  AMITK_SUBJECT_ORIENTATION_SUPINE_HEADFIRST,
  AMITK_SUBJECT_ORIENTATION_SUPINE_FEETFIRST,
  AMITK_SUBJECT_ORIENTATION_PRONE_HEADFIRST,
  AMITK_SUBJECT_ORIENTATION_PRONE_FEETFIRST,
  AMITK_SUBJECT_ORIENTATION_RIGHT_DECUBITUS_HEADFIRST,
  AMITK_SUBJECT_ORIENTATION_RIGHT_DECUBITUS_FEETFIRST,
  AMITK_SUBJECT_ORIENTATION_LEFT_DECUBITUS_HEADFIRST,
  AMITK_SUBJECT_ORIENTATION_LEFT_DECUBITUS_FEETFIRST,
  AMITK_SUBJECT_ORIENTATION_NUM
} AmitkSubjectOrientation;


enum AmitkImportMethod

typedef enum { /*< skip >*/
  AMITK_IMPORT_METHOD_GUESS, 
  AMITK_IMPORT_METHOD_RAW, 
#ifdef AMIDE_LIBDCMDATA_SUPPORT
  AMITK_IMPORT_METHOD_DCMTK,
#endif
#ifdef AMIDE_LIBECAT_SUPPORT
  AMITK_IMPORT_METHOD_LIBECAT,
#endif
#ifdef AMIDE_LIBMDC_SUPPORT
  AMITK_IMPORT_METHOD_LIBMDC,
#endif
  AMITK_IMPORT_METHOD_NUM
} AmitkImportMethod;


enum AmitkExportMethod

typedef enum { /*< skip >*/
  AMITK_EXPORT_METHOD_RAW, 
#ifdef AMIDE_LIBDCMDATA_SUPPORT
  AMITK_EXPORT_METHOD_DCMTK,
#endif
#ifdef AMIDE_LIBMDC_SUPPORT
  AMITK_EXPORT_METHOD_LIBMDC,
#endif
  AMITK_EXPORT_METHOD_NUM
} AmitkExportMethod;


struct AmitkDataSet

struct AmitkDataSet {
  AmitkVolume parent;

  /* parameters that are saved */
  gchar * scan_date; /* the time/day the image was acquired */
  gchar * subject_name; /* name of the subject */
  gchar * subject_id; /* id of the subject */
  gchar * subject_dob; /* date of birth of the subject */
  AmitkModality modality;
  AmitkPoint voxel_size;  /* in mm */
  AmitkRawData * raw_data;
  AmitkScalingType scaling_type; /*  dimensions of internal scaling */
  AmitkRawData * internal_scaling_factor; /* internally (data set) supplied scaling factor */
  AmitkRawData * internal_scaling_intercept; /* internally (data set) supplied scaling intercept */
  amide_time_t scan_start;
  amide_time_t * frame_duration; /* array of the duration of each frame */
  AmitkColorTable color_table[AMITK_VIEW_MODE_NUM]; /* the color table to draw this volume in */
  gboolean color_table_independent[AMITK_VIEW_MODE_NUM]; /* whether to use the independent color tables for 2-way or 3-way linked modes*/
  AmitkInterpolation interpolation;
  AmitkSubjectOrientation subject_orientation; /* orientation of subject in scanner */

  amide_data_t scale_factor; /* user specified factor to multiply data set by */
  AmitkConversion conversion;
  amide_data_t injected_dose;  /* in MBq */
  AmitkDoseUnit displayed_dose_unit;
  amide_data_t subject_weight; /* in KG */
  AmitkWeightUnit displayed_weight_unit;
  amide_data_t cylinder_factor; /* (MBq/cc)/Image Unit */
  AmitkCylinderUnit displayed_cylinder_unit;


  AmitkThresholding thresholding; /* what sort of thresholding we're using (per slice, global, etc.) */
  AmitkThresholdStyle threshold_style; /* min/max or center/width */
  amide_data_t threshold_max[2]; /* the thresholds to use for this volume */
  amide_data_t threshold_min[2]; 
  guint threshold_ref_frame[2];
  amide_data_t threshold_window[AMITK_WINDOW_NUM][AMITK_LIMIT_NUM];

  /* which gates we're showing */
  amide_intpoint_t view_start_gate;
  amide_intpoint_t view_end_gate;
  
  /* parameters calculated as needed or on loading the object */
  /* in theory, could be recalculated on the fly, but used enough we'll store... */
  AmitkRawData * distribution; /* 1D array of data distribution, used in thresholding */
  gboolean max_min_calculated; /* the min/max values can be calculated on demand */
  amide_data_t global_max;
  amide_data_t global_min;
  amide_data_t * frame_max; 
  amide_data_t * frame_min;
  AmitkRawData * current_scaling_factor; /* external_scaling * internal_scaling_factor[] */
  amide_intpoint_t num_view_gates;

  GList * slice_cache;
  gint max_slice_cache_size;

  /* only used by derived data sets (slices and projections)  */
  /* this is a weak pointer, it should be NULL'ed automatically by gtk on the parent's destruction */
  AmitkDataSet * slice_parent; 

  /* misc data items - not saved in .xif file */
  gdouble gate_time; /* used by dcmtk_interface.cc for sorting by gate */
  gint instance_number; /* used by dcmtk_interface.cc occasionally for sorting */
};


struct AmitkDataSetClass

struct AmitkDataSetClass {
  AmitkVolumeClass parent_class;

  void (* thresholding_changed)         (AmitkDataSet * ds);
  void (* threshold_style_changed)      (AmitkDataSet * ds);
  void (* thresholds_changed)           (AmitkDataSet * ds);
  void (* windows_changed)              (AmitkDataSet * ds);
  void (* color_table_changed)          (AmitkDataSet * ds,
					 AmitkViewMode * view_mode);
  void (* color_table_independent_changed)(AmitkDataSet * ds,
					   AmitkViewMode * view_mode);
  void (* interpolation_changed)        (AmitkDataSet * ds);
  void (* subject_orientation_changed)  (AmitkDataSet * ds);
  void (* conversion_changed)           (AmitkDataSet * ds);
  void (* scale_factor_changed)         (AmitkDataSet * ds);
  void (* modality_changed)             (AmitkDataSet * ds);
  void (* time_changed)                 (AmitkDataSet * ds);
  void (* voxel_size_changed)           (AmitkDataSet * ds);
  void (* data_set_changed)             (AmitkDataSet * ds);
  void (* invalidate_slice_cache)       (AmitkDataSet * ds);
  void (* view_gates_changed)           (AmitkDataSet * ds);
};


amitk_data_set_new ()

AmitkDataSet *      amitk_data_set_new                  (AmitkPreferences *preferences,
                                                         const AmitkModality modality);


amitk_data_set_new_with_data ()

AmitkDataSet *      amitk_data_set_new_with_data        (AmitkPreferences *preferences,
                                                         const AmitkModality modality,
                                                         const AmitkFormat format,
                                                         const AmitkVoxel dim,
                                                         const AmitkScalingType scaling_type);


amitk_data_set_import_raw_file ()

AmitkDataSet *      amitk_data_set_import_raw_file      (const gchar *file_name,
                                                         const AmitkRawFormat raw_format,
                                                         const AmitkVoxel data_dim,
                                                         guint file_offset,
                                                         AmitkPreferences *preferences,
                                                         const AmitkModality modality,
                                                         const gchar *data_set_name,
                                                         const AmitkPoint voxel_size,
                                                         const amide_data_t scale_factor,
                                                         AmitkUpdateFunc update_func,
                                                         gpointer update_data);


amitk_data_set_import_file ()

GList *             amitk_data_set_import_file          (AmitkImportMethod method,
                                                         int submethod,
                                                         const gchar *filename,
                                                         AmitkPreferences *preferences,
                                                         AmitkUpdateFunc update_func,
                                                         gpointer update_data);


amitk_data_set_export_to_file ()

void                amitk_data_set_export_to_file       (AmitkDataSet *ds,
                                                         const AmitkExportMethod method,
                                                         const int submethod,
                                                         const gchar *filename,
                                                         const gboolean resliced,
                                                         const AmitkPoint voxel_size,
                                                         const AmitkVolume *bounding_box,
                                                         AmitkUpdateFunc update_func,
                                                         gpointer update_data);


amitk_data_sets_export_to_file ()

void                amitk_data_sets_export_to_file      (GList *data_sets,
                                                         const AmitkExportMethod method,
                                                         const int submethod,
                                                         const gchar *filename,
                                                         const AmitkPoint voxel_size,
                                                         const AmitkVolume *bounding_box,
                                                         AmitkUpdateFunc update_func,
                                                         gpointer update_data);


amitk_data_set_get_global_max ()

amide_data_t        amitk_data_set_get_global_max       (AmitkDataSet *ds);


amitk_data_set_get_global_min ()

amide_data_t        amitk_data_set_get_global_min       (AmitkDataSet *ds);


amitk_data_set_get_frame_max ()

amide_data_t        amitk_data_set_get_frame_max        (AmitkDataSet *ds,
                                                         const guint frame);


amitk_data_set_get_frame_min ()

amide_data_t        amitk_data_set_get_frame_min        (AmitkDataSet *ds,
                                                         const guint frame);


amitk_data_set_get_color_table_to_use ()

AmitkColorTable     amitk_data_set_get_color_table_to_use
                                                        (AmitkDataSet *ds,
                                                         const AmitkViewMode view_mode);


amitk_data_set_set_modality ()

void                amitk_data_set_set_modality         (AmitkDataSet *ds,
                                                         const AmitkModality modality);


amitk_data_set_set_scan_start ()

void                amitk_data_set_set_scan_start       (AmitkDataSet *ds,
                                                         const amide_time_t start);


amitk_data_set_set_frame_duration ()

void                amitk_data_set_set_frame_duration   (AmitkDataSet *ds,
                                                         const guint frame,
                                                         amide_time_t duration);


amitk_data_set_set_voxel_size ()

void                amitk_data_set_set_voxel_size       (AmitkDataSet *ds,
                                                         const AmitkPoint voxel_size);


amitk_data_set_set_thresholding ()

void                amitk_data_set_set_thresholding     (AmitkDataSet *ds,
                                                         const AmitkThresholding thresholding);


amitk_data_set_set_threshold_style ()

void                amitk_data_set_set_threshold_style  (AmitkDataSet *ds,
                                                         const AmitkThresholdStyle threshold_style);


amitk_data_set_set_threshold_max ()

void                amitk_data_set_set_threshold_max    (AmitkDataSet *ds,
                                                         guint which_reference,
                                                         amide_data_t value);


amitk_data_set_set_threshold_min ()

void                amitk_data_set_set_threshold_min    (AmitkDataSet *ds,
                                                         guint which_reference,
                                                         amide_data_t value);


amitk_data_set_set_threshold_ref_frame ()

void                amitk_data_set_set_threshold_ref_frame
                                                        (AmitkDataSet *ds,
                                                         guint which_reference,
                                                         guint frame);


amitk_data_set_set_color_table ()

void                amitk_data_set_set_color_table      (AmitkDataSet *ds,
                                                         const AmitkViewMode view_mode,
                                                         const AmitkColorTable new_color_table);


amitk_data_set_set_color_table_independent ()

void                amitk_data_set_set_color_table_independent
                                                        (AmitkDataSet *ds,
                                                         const AmitkViewMode view_mode,
                                                         const gboolean independent);


amitk_data_set_set_interpolation ()

void                amitk_data_set_set_interpolation    (AmitkDataSet *ds,
                                                         const AmitkInterpolation new_interpolation);


amitk_data_set_set_subject_orientation ()

void                amitk_data_set_set_subject_orientation
                                                        (AmitkDataSet *ds,
                                                         const AmitkSubjectOrientation subject_orientation);


amitk_data_set_set_scan_date ()

void                amitk_data_set_set_scan_date        (AmitkDataSet *ds,
                                                         const gchar *new_date);


amitk_data_set_set_subject_name ()

void                amitk_data_set_set_subject_name     (AmitkDataSet *ds,
                                                         const gchar *new_name);


amitk_data_set_set_subject_id ()

void                amitk_data_set_set_subject_id       (AmitkDataSet *ds,
                                                         const gchar *new_id);


amitk_data_set_set_subject_dob ()

void                amitk_data_set_set_subject_dob      (AmitkDataSet *ds,
                                                         const gchar *new_dob);


amitk_data_set_set_conversion ()

void                amitk_data_set_set_conversion       (AmitkDataSet *ds,
                                                         AmitkConversion new_conversion);


amitk_data_set_set_scale_factor ()

void                amitk_data_set_set_scale_factor     (AmitkDataSet *ds,
                                                         amide_data_t new_scale_factor);


amitk_data_set_set_injected_dose ()

void                amitk_data_set_set_injected_dose    (AmitkDataSet *ds,
                                                         amide_data_t new_injected_dose);


amitk_data_set_set_subject_weight ()

void                amitk_data_set_set_subject_weight   (AmitkDataSet *ds,
                                                         amide_data_t new_subject_weight);


amitk_data_set_set_cylinder_factor ()

void                amitk_data_set_set_cylinder_factor  (AmitkDataSet *ds,
                                                         amide_data_t new_cylinder_factor);


amitk_data_set_set_displayed_dose_unit ()

void                amitk_data_set_set_displayed_dose_unit
                                                        (AmitkDataSet *ds,
                                                         AmitkDoseUnit new_dose_unit);


amitk_data_set_set_displayed_weight_unit ()

void                amitk_data_set_set_displayed_weight_unit
                                                        (AmitkDataSet *ds,
                                                         AmitkWeightUnit new_weight_unit);


amitk_data_set_set_displayed_cylinder_unit ()

void                amitk_data_set_set_displayed_cylinder_unit
                                                        (AmitkDataSet *ds,
                                                         AmitkCylinderUnit new_cylinder_unit);


amitk_data_set_set_threshold_window ()

void                amitk_data_set_set_threshold_window (AmitkDataSet *ds,
                                                         const AmitkWindow window,
                                                         const AmitkLimit limit,
                                                         const amide_data_t value);


amitk_data_set_set_view_start_gate ()

void                amitk_data_set_set_view_start_gate  (AmitkDataSet *ds,
                                                         amide_intpoint_t start_gate);


amitk_data_set_set_view_end_gate ()

void                amitk_data_set_set_view_end_gate    (AmitkDataSet *ds,
                                                         amide_intpoint_t end_gate);


amitk_data_set_get_start_time ()

amide_time_t        amitk_data_set_get_start_time       (const AmitkDataSet *ds,
                                                         const guint frame);


amitk_data_set_get_end_time ()

amide_time_t        amitk_data_set_get_end_time         (const AmitkDataSet *ds,
                                                         const guint frame);


amitk_data_set_get_midpt_time ()

amide_time_t        amitk_data_set_get_midpt_time       (const AmitkDataSet *ds,
                                                         const guint frame);


amitk_data_set_get_frame ()

guint               amitk_data_set_get_frame            (const AmitkDataSet *ds,
                                                         const amide_time_t time);


amitk_data_set_get_frame_duration ()

amide_time_t        amitk_data_set_get_frame_duration   (const AmitkDataSet *ds,
                                                         guint frame);


amitk_data_set_get_min_frame_duration ()

amide_time_t        amitk_data_set_get_min_frame_duration
                                                        (const AmitkDataSet *ds);


amitk_data_set_calc_far_corner ()

void                amitk_data_set_calc_far_corner      (AmitkDataSet *ds);


amitk_data_set_calc_max_min ()

void                amitk_data_set_calc_max_min         (AmitkDataSet *ds,
                                                         AmitkUpdateFunc update_func,
                                                         gpointer update_data);


amitk_data_set_get_max ()

amide_data_t        amitk_data_set_get_max              (AmitkDataSet *ds,
                                                         const amide_time_t start,
                                                         const amide_time_t duration);


amitk_data_set_get_min ()

amide_data_t        amitk_data_set_get_min              (AmitkDataSet *ds,
                                                         const amide_time_t start,
                                                         const amide_time_t duration);


amitk_data_set_get_thresholding_max_min ()

void                amitk_data_set_get_thresholding_max_min
                                                        (AmitkDataSet *ds,
                                                         AmitkDataSet *slice,
                                                         const amide_time_t start,
                                                         const amide_time_t duration,
                                                         amide_data_t *max,
                                                         amide_data_t *min);


amitk_data_set_calc_distribution ()

void                amitk_data_set_calc_distribution    (AmitkDataSet *ds,
                                                         AmitkUpdateFunc update_func,
                                                         gpointer update_data);


amitk_data_set_get_internal_value ()

amide_data_t        amitk_data_set_get_internal_value   (const AmitkDataSet *ds,
                                                         const AmitkVoxel i);


amitk_data_set_get_value ()

amide_data_t        amitk_data_set_get_value            (const AmitkDataSet *ds,
                                                         const AmitkVoxel i);


amitk_data_set_get_internal_scaling_factor ()

amide_data_t        amitk_data_set_get_internal_scaling_factor
                                                        (const AmitkDataSet *ds,
                                                         const AmitkVoxel i);


amitk_data_set_get_scaling_factor ()

amide_data_t        amitk_data_set_get_scaling_factor   (const AmitkDataSet *ds,
                                                         const AmitkVoxel i);


amitk_data_set_get_scaling_intercept ()

amide_data_t        amitk_data_set_get_scaling_intercept
                                                        (const AmitkDataSet *ds,
                                                         const AmitkVoxel i);


amitk_data_set_set_value ()

void                amitk_data_set_set_value            (AmitkDataSet *ds,
                                                         const AmitkVoxel i,
                                                         const amide_data_t value,
                                                         const gboolean signal_change);


amitk_data_set_set_internal_value ()

void                amitk_data_set_set_internal_value   (AmitkDataSet *ds,
                                                         const AmitkVoxel i,
                                                         const amide_data_t internal_value,
                                                         const gboolean signal_change);


amitk_data_set_get_projections ()

void                amitk_data_set_get_projections      (AmitkDataSet *ds,
                                                         const guint frame,
                                                         const guint gate,
                                                         AmitkDataSet **projections,
                                                         AmitkUpdateFunc update_func,
                                                         gpointer update_data);


amitk_data_set_get_cropped ()

AmitkDataSet *      amitk_data_set_get_cropped          (const AmitkDataSet *ds,
                                                         const AmitkVoxel start,
                                                         const AmitkVoxel end,
                                                         const AmitkFormat format,
                                                         const AmitkScalingType scaling_type,
                                                         AmitkUpdateFunc update_func,
                                                         gpointer update_data);


amitk_data_set_get_filtered ()

AmitkDataSet *      amitk_data_set_get_filtered         (const AmitkDataSet *ds,
                                                         const AmitkFilter filter_type,
                                                         const gint kernel_size,
                                                         const amide_real_t fwhm,
                                                         AmitkUpdateFunc update_func,
                                                         gpointer update_data);


amitk_data_set_get_slice ()

AmitkDataSet *      amitk_data_set_get_slice            (AmitkDataSet *ds,
                                                         const amide_time_t start,
                                                         const amide_time_t duration,
                                                         const amide_intpoint_t gate,
                                                         const AmitkCanvasPoint pixel_size,
                                                         const AmitkVolume *slice_volume);


amitk_data_set_get_line_profile ()

void                amitk_data_set_get_line_profile     (AmitkDataSet *ds,
                                                         const amide_time_t start,
                                                         const amide_time_t duration,
                                                         const AmitkPoint start_point,
                                                         const AmitkPoint end_point,
                                                         GPtrArray **preturn_data);


amitk_data_sets_count ()

gint                amitk_data_sets_count               (GList *objects,
                                                         gboolean recurse);


amitk_data_sets_get_min_frame_duration ()

amide_time_t        amitk_data_sets_get_min_frame_duration
                                                        (GList *objects);


amitk_data_sets_get_min_voxel_size ()

amide_real_t        amitk_data_sets_get_min_voxel_size  (GList *objects);


amitk_data_sets_get_max_min_voxel_size ()

amide_real_t        amitk_data_sets_get_max_min_voxel_size
                                                        (GList *objects);


amitk_data_sets_get_slices ()

GList *             amitk_data_sets_get_slices          (GList *objects,
                                                         GList **pslice_cache,
                                                         const gint max_slice_cache_size,
                                                         const amide_time_t start,
                                                         const amide_time_t duration,
                                                         const amide_intpoint_t gate,
                                                         const AmitkCanvasPoint pixel_size,
                                                         const AmitkVolume *view_volume);


amitk_data_sets_find_with_slice_parent ()

AmitkDataSet *      amitk_data_sets_find_with_slice_parent
                                                        (GList *slices,
                                                         const AmitkDataSet *slice_parent);


amitk_data_sets_remove_with_slice_parent ()

GList *             amitk_data_sets_remove_with_slice_parent
                                                        (GList *slices,
                                                         const AmitkDataSet *slice_parent);


amitk_data_sets_math ()

AmitkDataSet *      amitk_data_sets_math                (AmitkDataSet *ds1,
                                                         AmitkDataSet *ds2,
                                                         AmitkOperation operation,
                                                         gboolean by_frame,
                                                         AmitkUpdateFunc update_func,
                                                         gpointer update_data);


amitk_data_set_get_frame_duration_mem()

#define amitk_data_set_get_frame_duration_mem(ds) (g_try_new0(amide_time_t,(ds)->raw_data->dim.t))


amitk_data_set_get_frame_max_min_mem()

#define amitk_data_set_get_frame_max_min_mem(ds) (g_try_new0(amide_data_t,(ds)->raw_data->dim.t))


amitk_data_set_dynamic()

#define amitk_data_set_dynamic(ds) ((ds)->data_set->dim.t > 1)


amitk_scaling_type_get_name ()

const gchar *       amitk_scaling_type_get_name         (const AmitkScalingType scaling_type);


amitk_operation_get_name ()

const gchar *       amitk_operation_get_name            (const AmitkOperation operation);


amitk_interpolation_get_name ()

const gchar *       amitk_interpolation_get_name        (const AmitkInterpolation interpolation);


amitk_subject_orientation_get_name ()

const gchar *       amitk_subject_orientation_get_name  (const AmitkSubjectOrientation subject_orientation);


amitk_thresholding_get_name ()

const gchar *       amitk_thresholding_get_name         (const AmitkThresholding thresholding);


amitk_threshold_style_get_name ()

const gchar *       amitk_threshold_style_get_name      (const AmitkThresholdStyle threshold_style);


amitk_conversion_get_name ()

const gchar *       amitk_conversion_get_name           (const AmitkConversion conversion);


amitk_weight_unit_get_name ()

const gchar *       amitk_weight_unit_get_name          (const AmitkWeightUnit weight_unit);


amitk_dose_unit_get_name ()

const gchar *       amitk_dose_unit_get_name            (const AmitkDoseUnit dose_unit);


amitk_cylinder_unit_get_name ()

const gchar *       amitk_cylinder_unit_get_name        (const AmitkCylinderUnit cylinder_unit);


amitk_weight_unit_convert_to ()

amide_data_t        amitk_weight_unit_convert_to        (const amide_data_t kg,
                                                         const AmitkWeightUnit weight_unit);


amitk_weight_unit_convert_from ()

amide_data_t        amitk_weight_unit_convert_from      (const amide_data_t weight,
                                                         const AmitkWeightUnit weight_unit);


amitk_dose_unit_convert_to ()

amide_data_t        amitk_dose_unit_convert_to          (const amide_data_t MBq,
                                                         const AmitkDoseUnit dose_unit);


amitk_dose_unit_convert_from ()

amide_data_t        amitk_dose_unit_convert_from        (const amide_data_t dose,
                                                         const AmitkDoseUnit dose_unit);


amitk_cylinder_unit_convert_to ()

amide_data_t        amitk_cylinder_unit_convert_to      (const amide_data_t MBq_cc_image_units,
                                                         const AmitkCylinderUnit cylinder_unit);


amitk_cylinder_unit_convert_from ()

amide_data_t        amitk_cylinder_unit_convert_from    (const amide_data_t cylinder_factor,
                                                         const AmitkCylinderUnit cylinder_unit);