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XTandemXMLFile Member List

This is the complete list of members for XTandemXMLFile, including all inherited members.

ActionMode enum nameXMLHandlerprotected
actual_charge_XTandemXMLFileprivate
actual_id_XTandemXMLFileprivate
actual_protein_id_XTandemXMLFileprivate
actual_start_XTandemXMLFileprivate
actual_stop_XTandemXMLFileprivate
asBool_(const String &in)XMLHandlerinlineprotected
asDateTime_(String date_string)XMLHandlerinlineprotected
asDouble_(const String &in)XMLHandlerinlineprotected
asFloat_(const String &in)XMLHandlerinlineprotected
asInt_(const String &in)XMLHandlerinlineprotected
asInt_(const XMLCh *in)XMLHandlerinlineprotected
asUInt_(const String &in)XMLHandlerinlineprotected
attributeAsDouble_(const xercesc::Attributes &a, const char *name) const XMLHandlerinlineprotected
attributeAsDouble_(const xercesc::Attributes &a, const XMLCh *name) const XMLHandlerinlineprotected
attributeAsDoubleList_(const xercesc::Attributes &a, const char *name) const XMLHandlerinlineprotected
attributeAsDoubleList_(const xercesc::Attributes &a, const XMLCh *name) const XMLHandlerinlineprotected
attributeAsInt_(const xercesc::Attributes &a, const char *name) const XMLHandlerinlineprotected
attributeAsInt_(const xercesc::Attributes &a, const XMLCh *name) const XMLHandlerinlineprotected
attributeAsIntList_(const xercesc::Attributes &a, const char *name) const XMLHandlerinlineprotected
attributeAsIntList_(const xercesc::Attributes &a, const XMLCh *name) const XMLHandlerinlineprotected
attributeAsString_(const xercesc::Attributes &a, const char *name) const XMLHandlerinlineprotected
attributeAsString_(const xercesc::Attributes &a, const XMLCh *name) const XMLHandlerinlineprotected
attributeAsStringList_(const xercesc::Attributes &a, const char *name) const XMLHandlerinlineprotected
attributeAsStringList_(const xercesc::Attributes &a, const XMLCh *name) const XMLHandlerinlineprotected
characters(const XMLCh *const chars, const XMLSize_t)XTandemXMLFileprotectedvirtual
cv_terms_XMLHandlerprotected
cvStringToEnum_(const Size section, const String &term, const char *message, const SignedSize result_on_error=0)XMLHandlerinlineprotected
endElement(const XMLCh *const , const XMLCh *const , const XMLCh *const qname)XTandemXMLFileprotectedvirtual
enforced_encoding_XMLFileprotected
enforceEncoding_(const String &encoding)XMLFileprotected
equal_(const XMLCh *a, const XMLCh *b) const XMLHandlerinlineprotected
error(const xercesc::SAXParseException &exception)XMLHandlerprotected
error(ActionMode mode, const String &msg, UInt line=0, UInt column=0) const XMLHandlerprotected
error_message_XMLHandlermutableprotected
errorString()XMLHandlerprotected
fatalError(const xercesc::SAXParseException &exception)XMLHandlerprotected
fatalError(ActionMode mode, const String &msg, UInt line=0, UInt column=0) const XMLHandlerprotected
file_XMLHandlerprotected
getVersion() const XMLFile
is_description_XTandemXMLFileprivate
isValid(const String &filename, std::ostream &os)XMLFile
LOAD enum valueXMLHandlerprotected
load(const String &filename, ProteinIdentification &protein_identification, std::vector< PeptideIdentification > &id_data)XTandemXMLFile
mod_def_set_XTandemXMLFileprivate
open_tags_XMLHandlerprotected
operator=(const XTandemXMLFile &rhs)XTandemXMLFileprotected
optionalAttributeAsDouble_(double &value, const xercesc::Attributes &a, const char *name) const XMLHandlerinlineprotected
optionalAttributeAsDouble_(double &value, const xercesc::Attributes &a, const XMLCh *name) const XMLHandlerinlineprotected
optionalAttributeAsDoubleList_(DoubleList &value, const xercesc::Attributes &a, const char *name) const XMLHandlerinlineprotected
optionalAttributeAsDoubleList_(DoubleList &value, const xercesc::Attributes &a, const XMLCh *name) const XMLHandlerinlineprotected
optionalAttributeAsInt_(Int &value, const xercesc::Attributes &a, const char *name) const XMLHandlerinlineprotected
optionalAttributeAsInt_(Int &value, const xercesc::Attributes &a, const XMLCh *name) const XMLHandlerinlineprotected
optionalAttributeAsIntList_(IntList &value, const xercesc::Attributes &a, const char *name) const XMLHandlerinlineprotected
optionalAttributeAsIntList_(IntList &value, const xercesc::Attributes &a, const XMLCh *name) const XMLHandlerinlineprotected
optionalAttributeAsString_(String &value, const xercesc::Attributes &a, const char *name) const XMLHandlerinlineprotected
optionalAttributeAsString_(String &value, const xercesc::Attributes &a, const XMLCh *name) const XMLHandlerinlineprotected
optionalAttributeAsStringList_(StringList &value, const xercesc::Attributes &a, const char *name) const XMLHandlerinlineprotected
optionalAttributeAsStringList_(StringList &value, const xercesc::Attributes &a, const XMLCh *name) const XMLHandlerinlineprotected
optionalAttributeAsUInt_(UInt &value, const xercesc::Attributes &a, const char *name) const XMLHandlerinlineprotected
optionalAttributeAsUInt_(UInt &value, const xercesc::Attributes &a, const XMLCh *name) const XMLHandlerinlineprotected
parse_(const String &filename, XMLHandler *handler)XMLFileprotected
peptide_hits_XTandemXMLFileprivate
protein_hits_XTandemXMLFileprivate
protein_identification_XTandemXMLFileprivate
protein_open_XTandemXMLFileprivate
reset()XMLHandlerprotected
save_(const String &filename, XMLHandler *handler) const XMLFileprotected
schema_location_XMLFileprotected
schema_version_XMLFileprotected
setModificationDefinitionsSet(const ModificationDefinitionsSet &rhs)XTandemXMLFile
sm_XMLHandlerprotected
startElement(const XMLCh *const , const XMLCh *const , const XMLCh *const qname, const xercesc::Attributes &attributes)XTandemXMLFileprotectedvirtual
STORE enum valueXMLHandlerprotected
tag_XTandemXMLFileprivate
version_XMLHandlerprotected
warning(const xercesc::SAXParseException &exception)XMLHandlerprotected
warning(ActionMode mode, const String &msg, UInt line=0, UInt column=0) const XMLHandlerprotected
writeTo(std::ostream &)XMLHandlerprotectedvirtual
writeUserParam_(const String &tag_name, std::ostream &os, const MetaInfoInterface &meta, UInt indent) const XMLHandlerprotected
writeXMLEscape(const String &to_escape)XMLHandlerinlineprotectedstatic
XMLFile()XMLFile
XMLFile(const String &schema_location, const String &version)XMLFile
XMLHandler(const String &filename, const String &version)XMLHandlerprotected
XTandemXMLFile()XTandemXMLFile
XTandemXMLFile(const XTandemXMLFile &rhs)XTandemXMLFileprotected
~XMLFile()XMLFilevirtual
~XMLHandler()XMLHandlerprotectedvirtual
~XTandemXMLFile()XTandemXMLFilevirtual

OpenMS / TOPP release 2.0.0 Documentation generated on Thu Aug 20 2015 01:44:42 using doxygen 1.8.9.1