Extracts 'n' peptides randomly or best 'n' from idXML files.
Input and output format are 'idXML'. The tools allows you to extract subsets of peptides from idXML files.
IDExtractor -- Extracts 'n' peptides randomly or best 'n' from idXML files. Version: 2.0.0 Aug 19 2015, 22:19:33, Revision: GIT-NOTFOUND Usage: IDExtractor <options> Options (mandatory options marked with '*'): -in <file>* Input file (valid formats: 'idXML') -out <file>* Output file (valid formats: 'idXML') -number_of_peptides <int> Number of randomly chosen peptides (default: '10' min: '1') -number_of_rand_invokations <int> Number of rand invocations before random draw (default: '0' min: '0') -best_hits If this flag is set the best n peptides are chosen. Common UTIL options: -ini <file> Use the given TOPP INI file -threads <n> Sets the number of threads allowed to be used by the TOPP tool (default: '1') -write_ini <file> Writes the default configuration file --help Shows options --helphelp Shows all options (including advanced)INI file documentation of this tool:
OpenMS / TOPP release 2.0.0 | Documentation generated on Thu Aug 20 2015 01:44:32 using doxygen 1.8.9.1 |